Publications

Ahuja G, Sharma A, Singh A, Kedia S, Sharma A, Gautam V, Sharma P, Khandelwal A, Ramakrishna S, Muddashetty R, Freude K. Cross-Species Aging Knowledge Integration into Agentic AI Platform Uncovers Conserved Mechanisms.

Jagadeeshan P, Maladakar A, Sahu L, Kumari P, Reddy V, Lodha L, Mani RS. Clinical evaluation of a commercial real-time PCR kit for diagnosis of acute dengue infection. Japanese journal of infectious diseases. 2026 Jan 30.

Rai H, Singh R, Shankar G, Rai S, Kumar P, Nilakhe AS, Singh N, Bhadoria P, Singh G, Ramanathan V, Gupta S. Discovery of NIRF theranostic probes targeting amyloid-β and cholinesterases in Alzheimer’s disease models. Nature Communications. 2026 Jan 26.

Mukherjee V, Yanamandra R, Rai N, Mahalingaswamy M, Mathiyazhagan N, Shandilya D, Bevinahalli Nanjegowda N, Rao S, Srinivas D, Sadashiva N, Fabrice TN. Coronin 1 Loss in Tumor Cells of Glioblastoma Patients Leads to Enhanced Tumor Aggressiveness. Journal of Neurochemistry. 2025 Oct;169(10):e70261.

Goyal A, Rao S, Saha AK, Sugur H, Poulose R, Shirke O, Mohanraj N, Mehta B, Philip M, Arivazhagan A, Saini J. Role of Astrocytic and Microglial Phenotype in the Biology of Hippocampal Sclerosis. Neuropathology and Applied Neurobiology. 2025 Oct;51(5):e70044.

Naskar A, Sachin M, Sengupta S, Bhadrachalam P, Hegde S, Yadav R, Pal PK, Alladi PA. Fibrinogen and Complement Factor H Induce Parkinsonian and Cognitive Impairment-Like Features in Mice. Cellular and Molecular Neurobiology. 2025 May 30;45(1):54.

Zehra S, Rai S, Rani K, Choudhury SD, Rai H, Bhowmik S, Mohan N, Gupta A, Chatterjee P, Reddy TJ, Rani N. Stress-Induced Alteration of Small Extracellular Vesicles Drives Amyloid-Beta Sequestration and Exacerbates Alzheimer’s Disease Pathogenesis. bioRxiv. 2025 May 27:2025-05.

Parthaje S, Janardhanan M, Paul P, Karunakaran KB, Deb AP, Shankarappa B, Pal PK, Mahadevan A, Jain S, Viswanath B, Purushottam M. CAG repeat instability and region-specific gene expression changes in the SCA12 brain. The Cerebellum. 2025 Mar 13;24(3):60.

Sarkar C, Mahadevan A, Chacko G, Rao S, Suri V, Uppin M, Santosh V. Neuropathology practice in India: a survey of the current status of diagnostics and training in tertiary care centres. Pathology. 2025 Mar 1;57(2):253-66.

Uppoor S, Damodar T, Lodha L, Nagarajaiah MH, Mani RS. Evolving dengue serotype distribution with dominance of dengue virus-3 in Bangalore: critical insights for vaccine efficacy and implementation. Lancet Southeast Asia. 2024;100485. doi:10.1016/j.lansea.2024.100485

Rai H, Singh R, Bharti PS, Kumar P, Rai S, Varma T, Chauhan BS, Nilakhe AS, Debnath J, Dhingra R, Mishra VN. Rhodanine composite fluorescence probes to detect pathological hallmarks in Alzheimer's disease models. Sensors and Actuators B: Chemical. 2024 May 15;407:135364.

Pandurangan K, Jayakumar J, Savoia S, Nanda R, Lata S, Kumar EH, Vasudevan S, Srinivasan C, Joseph J, Sivaprakasam M, Verma R. Systematic development of immunohistochemistry protocol for large Cryosections-specific to non-perfused fetal brain. Journal of Neuroscience Methods. 2024 May 1;405:110085.

Kishore, M., Pradeep, M., Narne, P. et al. Correction to: Regulation of Keap1-Nrf2 axis in temporal lobe epilepsy—hippocampal sclerosis patients may limit the seizure outcomes. Neurol Sci 45, 377 (2024). https://doi.org/10.1007/s10072-023-06973-9

Kasle G, Sharma M, Kumar S, Das P, Das Sarma S, Koval M, Mahadevan A, Kenyon LC, Das Sarma J. 4-Phenylbutyric acid modulates Connexin 43 expression restricting murine-β-coronavirus infectivity and virus-induced demyelination. bioRxiv. 2024:2024-12.

Himanshu Rai, Rishabh Singh, Prahalad Singh Bharti, Prabhat Kumar, Sanskriti Rai, Tanmaykumar Varma, Brijesh Singh Chauhan, Aishwarya Srikant Nilakhe, Joy Debnath, Renu Dhingra, Vijay N. Mishra, Sarika Gupta, Sairam Krishnamurthy, Jian Yang, Prabha Garg, Saripella Srikrishna, Saroj Kumar, Gyan Modi, Rhodanine composite fluorescence probes to detect pathological hallmarks in Alzheimer's disease models, Sensors and Actuators B: Chemical, Volume 407, 2024, 135364, ISSN 0925-4005, https://doi.org/10.1016/j.snb.2024.135364.

Chauhan M, Singh K, Chongtham C, AG A, Sharma P. miR-449a mediated repression of the cell cycle machinery prevents neuronal apoptosis. Journal of Biological Chemistry. 2024 Sep 1;300(9).

Bhawangirkar S, Panigrahi M, Immaneni S, Phanithi P. Cortactin and SIRT1 increased expression levels are associated with meningioma patients.

Siddique, I.; Kamble, K.; Gupta, S.; Solanki, K.; Bhola, S.; Ahsan, N.; Gupta, S. ARL6IP5 Ameliorates α-Synuclein Burden by Inducing Autophagy via Preventing Ubiquitination and Degradation of ATG12. Int. J. Mol. Sci. 2023, 24, 10499. https://doi.org/10.3390/ ijms241310499

Reeta Mani, P Harsha, Pramada Prasad, et al. Whole genome sequencing of rabies virus from archived human and canine brain tissues from southern India using Nanopore technology. Authorea. March 01, 2023.

Patnam S, Majumder B, Joshi P, Singh AD, Nagalla B, Kumar D, Biswas M, Ranjan A, Majumder PK, Rengan AK, Kamath AV, Ray A, Manda SV. “Differential Expression of SRY-Related HMG-Box Transcription Factor 2, Oligodendrocyte Lineage Transcription Factor 2, and Zinc Finger E-Box Binding Homeobox 1 in Serum-Derived Extracellular Vesicles: Implications for Mithramycin Sensitivity and Targeted Therapy in High-Grade Glioma”. ACS Pharmacol Transl Sci. 2023 Dec 18;7(1):137-149. doi: 10.1021/acsptsci.3c00198

Naskar A, Sachin M, Sengupta S, Bhadrachalam P, Hegde S, Yadav R, Pal PK, Alladi PA. Fibrinogen and complement factor H: The two crucial markers of Parkinson’s disease with cognitive impairment. bioRxiv. 2023 Oct 29:2023-10.

Mol P, Balaya RDA, Dagamajalu S, Babu S, Chandrasekaran P, Raghavan R, Suresh S, Ravishankara N, Raju AH, Nair B, Modi PK, Mahadevan A, Prasad TSK, Raju R. A network map of GDNF/RET signaling pathway in physiological and pathological conditions. J Cell Commun Signal. 2023 Sep;17(3):1089-1095. doi:10.1007/s12079-023-00726-1. Epub 2023 Jan 30. PMID: 36715855; PMCID:PMC10409931

Mol P, Balaya RDA, Dagamajalu S, Babu S, Chandrasekaran P, Raghavan R, Suresh S, Ravishankara N, Raju AH, Nair B, Modi PK, Mahadevan A, Prasad TSK, Raju R. A network map of GDNF/RET signaling pathway in physiological and pathological conditions. J Cell Commun Signal. 2023 Sep;17(3):1089-1095. doi:10.1007/s12079-023-00726-1. Epub 2023 Jan 30. PMID: 36715855; PMCID:PMC10409931

Madhamanchi, K., Madhamanchi, P., Jayalakshmi, S. et al. Dopamine and Glutamate Crosstalk Worsen the Seizure Outcome in TLE-HS Patients. Mol Neurobiol 60, 4952–4965 (2023). https://doi.org/10.1007/s12035-023-03361-4

Lodha L, Ananda AM, Ramachandran A, et al. Evaluation of a rapid, chip-based, micro-PCR assay for detection of rabies virus in human and canine specimens. J Med Virol. 2023; 95:e29110. doi:10.1002/jmv.29110

Kakkar M, Patil JM, Trivedi V, Yadav A, Saha RK, Rao S, Vazhayil V, Pandya HJ, Mahadevan A, Shekhar H, Mercado-Shekhar KP. Hermite-scan imaging for differentiating glioblastoma from normal brain: Simulations and ex vivo studies for applications in intra-operative tumor identification. The Journal of the Acoustical Society of America. 2023 Dec 1;154(6):3833-41.

John DV, Sreenivas N, Deora H, Purushottam M, Debnath M, Mahadevan A, Patil SA. Cerebrospinal fluid inflammatory cytokine profiles of patients with neurotropic parasitic infections. Trop Biomed. 2023 Dec 1;40(4):406-415. doi: 10.47665/tb.40.4.005. PMID: 38308827.

Gowthami, N., Pursotham, N., Dey, G., Ghose, V., Sathe, G., Pruthi, N., Shukla, D., Gayathri, N., Santhoshkumar, R., Padmanabhan, B., Chandramohan, V., Mahadevan, A., & Srinivas Bharath, M. M. (2023). Neuroanatomical zones of human traumatic brain injury reveal significant differences in protein profile and protein oxidation: Implications for secondary injury events. Journal of Neurochemistry, 167, 218–247. https://doi.org/10.1111/jnc.15953

Botta R, Keshav KJ, Kutty B, Mahadevan A, Pal PK, Yadav R. NIMHANS Neuropsychological Battery for Elderly in Parkinson's Disease Patients: Validation and Diagnosis using MDS PD-MCI Task Force Criteria in Indian Population. Ann Indian Acad Neurol. 2023 May-Jun;26(3):247-255. doi: 10.4103/aian.aian_903_22. Epub 2023 Apr 28. PMID: 37538425; PMCID: PMC10394447.

Banerjee A, Biswas D, Barpanda A, Halder A, Sibal S, Kattimani R, Shah A, Mahadevan A, Goel A, Srivastava S. The first pituitary proteome landscape from matched anterior and posterior lobes for a better understanding of the pituitary gland. *Mol Cell Proteomics.* 2023;22(1):100478. doi:10.1016/j.mcpro.2022.100478.

Rajeswarie RT, Aravinda HR, Arivazhagan A, Bevinahalli NN, Rao MB, Mahadevan A. Evaluating the Role of Perilesional Tissue in Pathobiology of Epileptogenesis of Vascular Malformations of the Central Nervous System. J Epilepsy Res. 2022 Dec 30;12(2):53-61. doi: 10.14581/jer.22010. PMID: 36685742; PMCID: PMC9830028.

Netravathi M, Dhamija K, Gupta M, Tamborska A, Nalini A, Holla VV, Nitish LK, Menon D, Pal PK, Seena V, Yadav R, Ravindranadh M, Faheem A, Saini J, Mahadevan A, Solomon T, Singh B. COVID-19 vaccine associated demyelination & its association with MOG antibody. Mult Scler Relat Disord. 2022 Apr;60:103739. doi:10.1016/j.msard.2022.103739. Epub 2022 Mar 13. PMID: 35306244; PMCID:PMC8917969.

Mol P, Gopalakrishnan L, Chatterjee O, Mangalaparthi KK, Kumar M, Durgad SS, Nair B, Shankar SK, Mahadevan A, Prasad TSK. Proteomic Analysis of Adult Human Hippocampal Subfields Demonstrates Regional Heterogeneity in the Protein Expression. J Proteome Res. 2022 Oct 7;21(10):2293-2310. doi: 10.1021/acs.jproteome.2c00143. Epub 2022 Aug 30. PMID: 36039803.

Mol P, Chatterjee O, Gopalakrishnan L, Mangalaparthi KK, Bhat F, Kumar M, Nair B, Shankar SK, Mahadevan A, Prasad TSK. Age-Associated Molecular Changes in Human Hippocampus Subfields as Determined by Quantitative Proteomics. OMICS. 2022 Jul;26(7):382-391. doi: 10.1089/omi.2022.0053. Epub 2022 Jun 28. PMID:35759428.

Jha S, Nagaraj C, Mundlamuri RC, Alladi S, Nashi S, Kenchaiah R, Mahadevan A, Bhat M, Saini J, Netravathi M. FDG-PET in Autoimmune Encephalitis: Utility, Pattern of Abnormalities, and Correlation with Autoantibodies. Ann Indian Acad Neurol. 2022 Nov-Dec;25(6):1122-1129. doi: 10.4103/aian.aian_645_22. Epub 2022 Dec 3. PMID: 36911487; PMCID: PMC9996532.

Harsha PK, Ranganayaki S, Yale G, Dey G, Mangalaparthi KK, Yarlagadda A, Chandrasekhar Sagar BK, Mahadevan A, Srinivas Bharath MM#, Mani RS. Mitochondrial Dysfunction in Rabies Virus-Infected Human and Canine Brains. Neurochem Res. 2022; 47:1610-1636. PMID: 35229271

Ganesh RA, Sonpatki P, Naik D, John AE, Sathe G, Lakshmikantha A, Chandrachari KP, Bauer L, Knäuper V, Aeschlimann D, Venkatraaman K, Shah N, Sirdeshmukh R. Multi- Omics Analysis of Glioblastoma and Glioblastoma Cell Line: Molecular Insights Into the Functional Role of GPR56 and TG2 in Mesenchymal Transition. Front Oncol. 2022 May 3;12:841890. doi: 10.3389/fonc.2022.841890 (PMID: 35600402)

Chakraborty, S. & Basu, A. miR-451a Regulates Neuronal Apoptosis by Modulating 14-3-3ζ-JNK Axis upon Flaviviral Infection. mSphere 7, e00208-22 (2022).

Anusha-Kiran Y, Mol P, Dey G, Bhat FA, Chatterjee O, Deolankar SC, Philip M, Prasad TSK, Srinivas Bharath MM#, Mahadevan A. Regional heterogeneity in mitochondrial function underlies region specific vulnerability in human brain ageing: Implications for neurodegeneration. Free Radic Biol Med. 2022; 193:34-57. PMID: 36195160

Teertam SK, Prakash Babu P. Differential role of SIRT1/MAPK pathway during cerebral ischemia in rats and humans. Scientific Reports. 2021 Mar 18;11(1):6339.

Kalpana SR, Saikant R, Nanjappa MC, Mahadevan A, Jayshree RS. The prevalence of enteroviral RNA and protein in mitral valves of chronic rheumatic heart disease. The Journal of Infection in Developing Countries. 2021 Apr 30;15(04):566-72.

Dhinakaran S, Mahadevan A, Unchagi A, Kulkarni GB, Nagappa M, Chickabasaviah YT, Sankaran BP, Taly AB, Shankar SK. Is Perls Prussian blue stain for hemosiderin a useful adjunct in the diagnosis of vasculitic neuropathies?. Neurology India. 2021 Jan 1;69(1):140-6.

Deolankar SC, Patil AH, Rex DAB, Subba P, Mahadevan A, Prasad TSK. Mapping Post-Translational Modifications in Brain Regions in Alzheimer's Disease Using Proteomics Data Mining. OMICS. 2021 Aug;25(8):525-536. doi:10.1089/omi.2021.0054. Epub 2021 Jul 13. PMID: 34255573.

Deogharkar A, Singh SV, Bharambe HS, Paul R, Moiyadi A, Goel A, Shetty P, Sridhar E, Gupta T, Jalali R, Goel N. Downregulation of ARID1B, a tumor suppressor in the WNT subgroup medulloblastoma, activates multiple oncogenic signaling pathways. Human Molecular Genetics. 2021 Sep 15;30(18):1721-33.

Chatterjee O, Gopalakrishnan L, Mol P, Advani J, Nair B, Shankar SK, Mahadevan A, Prasad TSK. The Normal Human Adult Hypothalamus Proteomic Landscape: Rise of Neuroproteomics in Biological Psychiatry and Systems Biology.OMICS. 2021 Nov;25(11):693-710. doi: 10.1089/omi.2021.0158. Epub 2021 Oct 29. PMID: 34714154.

Chatterjee O, Gopalakrishnan L, Mol P, Advani J, Nair B, Shankar SK, Mahadevan A, Prasad TS. The normal human adult hypothalamus proteomic landscape: rise of neuroproteomics in biological psychiatry and systems biology. OMICS: A Journal of Integrative Biology. 2021 Nov 1;25(11):693-710.

Wijesinghe P. Age-related cytoskeletal pathologies: A study on elderly brains to investigate the extent of neuropathological and cerebrovascular changes at death ad their risk factors.

Wijesinghe P, Steinbusch HW, Shankar SK, Yasha TC, De Silva KR. Circle of Willis abnormalities and their clinical importance in ageing brains: A cadaveric anatomical and pathological study. Journal of Chemical Neuroanatomy. 2020 Jul 1;106:101772.

Paul D, Ansari AH, Lal M, Mukhopadhyay A. Human brain shows recurrent non-canonical MicroRNA editing events enriched for seed sequence with possible functional consequence. Non-coding RNA. 2020 Jun 2;6(2):21.

Nandeesh BN, Bindu PS, Narayanappa G, Chickabasaviah Yasha T, Mahadevan A, Kulanthaivelu K, Santosh V. Cerebral small vessel disease with hemorrhagic stroke related to COL4A1 mutation: A case report. Neuropathology. 2020 Feb;40(1):93-8.

Mukherjee S, Biswas D, Gadre R, Jain P, Syed N, Stylianou J, Zeng Q, Mahadevan A, Epari S, Shetty P, Moiyadi A. Comprehending meningioma signaling cascades using multipronged proteomics approaches & targeted validation of potential markers. Frontiers in Oncology. 2020 Aug 26;10:1600.

Mehani B, Narta K, Paul D, Raj A, Kumar D, Sharma A, Kaurani L, Nayak S, Dash D, Suri A, Sarkar C. Fusion transcripts in normal human cortex increase with age and show distinct genomic features for single cells and tissues. Scientific Reports. 2020 Jan 28;10(1):1368.

Kedia S, Ramakrishna P, Netrakanti PR, Singh N, Sisodia SS, Jose M, Kumar S, Mahadevan A, Ramanan N, Nadkarni S, Nair D. Alteration in synaptic nanoscale organization dictates amyloidogenic processing in Alzheimer's disease. iScience. 2020 Dec 11;24(1):101924. doi: 10.1016/j.isci.2020.101924. PMID: 33409475; PMCID: PMC7773964.

Naskar A, Mahadevan A, Philip M, Alladi PA. Aging mildly affects dendritic arborisation and synaptic protein expression in human substantia nigra pars compacta. Journal of Chemical Neuroanatomy. 2019 Apr 1;97:57-65.

Mukherjee S, Akbar I, Bhagat R, Hazra B, Bhattacharyya A, Seth P, Roy D, Basu A. Identification and classification of hubs in microRNA target gene networks in human neural stem/progenitor cells following Japanese encephalitis virus infection. Msphere. 2019 Oct 30;4(5):10-128.

Krishnan SS, Muthiah S, Rao S, Salem SS, Madabhushi VC, Mahadevan A. Mindbomb homolog-1 index in the prognosis of high-grade glioma and its clinicopathological correlation. Journal of neurosciences in rural practice. 2019 Apr;10(2):185.

Govekar SR, Lakshman LP, Reddy V, Mani RS, Mahadevan A, Susarla SK, Desai A, Banda RK, Vasanthapuram R. Syndrome evaluation system for simultaneous detection of pathogens causing acute encephalitic syndrome in India, Part-2: validation using well characterized clinical samples. Frontiers in Neurology. 2019 Jan 15;9:1193.

Yelamanchi SD, Tyagi A, Mohanty V, Dutta P, Korbonits M, Chavan S, Advani J, Madugundu AK, Dey G, Datta KK, Rajyalakshmi M. Proteomic analysis of the human anterior pituitary gland. OMICS: A Journal of Integrative Biology. 2018 Dec 1;22(12):759-69.

Wang C, Iashchishyn IA, Pansieri J, Nyström S, Klementieva O, Kara J, Horvath I, Moskalenko R, Rofougaran R, Gouras G, Kovacs GG. S100A9-driven amyloid-neuroinflammatory cascade in traumatic brain injury as a precursor state for Alzheimer’s disease. Scientific Reports. 2018 Aug 27;8(1):12836.

Vijaykumar BR, Kant RS, Rajendran C, Lekshmi SU, Keerthana S, Mahadevan A, Shankar SK, Jayshree RS. Restriction fragment length polymorphism-based genotyping of Toxoplasma gondii from autopsy-proven cases of acquired immunodeficiency syndrome-associated cerebral toxoplasmosis. Annals of Indian Academy of Neurology. 2018 Oct 1;21(4):250-5.

Swaroop S, Mahadevan A, Shankar SK, Adlakha YK, Basu A. HSP60 critically regulates endogenous IL-1β production in activated microglia by stimulating NLRP3 inflammasome pathway. Journal of Neuroinflammation. 2018 Jun 9;15(1):177.

Rao D, Vasanthapuram R, Satishchandra P, Desai A. Pattern recognition receptor mRNA expression and cytokine and granzyme levels in HIV infected individuals with neurotuberculosis. Journal of Neuroimmunology. 2018 May 15;318:21-8.

Rai A, Singh PK, Singh V, Kumar V, Mishra R, Thakur AK, Mahadevan A, Shankar SK, Jana NR, Ganesh S. Glycogen synthase protects neurons from cytotoxicity of mutant huntingtin by enhancing the autophagy flux. Cell death & disease. 2018 Feb 8;9(2):201.

Mukherjee S, Singh N, Sengupta N, Fatima M, Seth P, Mahadevan A, Shankar SK, Bhattacharyya A, Basu A. Japanese encephalitis virus induces human neural stem/progenitor cell death by elevating GRP78, PHB and hnRNPC through ER stress. Cell death & disease. 2018 Jan;8(1):e2556-.

Mukherjee S, Sengupta N, Chaudhuri A, Akbar I, Singh N, Chakraborty S, Suryawanshi AR, Bhattacharyya A, Basu A. PLVAP and GKN3 are two critical host cell receptors which facilitate Japanese encephalitis virus entry into neurons. Scientific reports. 2018 Aug 6;8(1):11784.

Mukherjee S, Akbar I, Kumari B, Vrati S, Basu A, Banerjee A. Japanese encephalitis virus infected microglial cells secrete exosomes containing let-7a/b that facilitate neuronal damage via caspase activation. bioRxiv. 2018 May 17:324715.

Kumar M, Varun CN, Dey G, Ravikumar R, Mahadevan A, Shankar SK, Prasad TK. Identification of host‐response in cerebral malaria patients using quantitative proteomic analysis. PROTEOMICS–Clinical Applications. 2018 Jul;12(4):1600187.

Dutta D, Ali N, Banerjee E, Singh R, Naskar A, Paidi RK, Mohanakumar KP. Low levels of prohibitin in substantia nigra makes dopaminergic neurons vulnerable in Parkinson’s disease. Molecular Neurobiology. 2018 Jan;55(1):804-21.

Wijesinghe P, Gorrie C, Shankar SK, Chickabasaviah YT, Amaratunga D, Hulathduwa S, Kumara KS, Samarasinghe K, Suh YH, Steinbusch HW, De Silva KR. Early stages of Alzheimer's disease are alarming signs in injury deaths caused by traffic accidents in elderly people (≥ 60 years of age): A neuropathological study. Indian journal of psychiatry. 2017 Oct 1;59(4):471-7.

Sur D, Kustwar RK, Budania S, Mahadevan A, Hancks DC, Yadav V, Shankar SK, Mandal PK. Detection of the LINE-1 retrotransposon RNA-binding protein ORF1p in different anatomical regions of the human brain. Mobile DNA. 2017 Nov 22;8(1):17.

Pandya SK, Shankar SK. Dr. Harry M. Zimmerman (1901–1995): Neuropathologist who autopsied Dr. Harvey Cushing, and his interactions with Indian colleagues. Neurology India. 2017 Sep 1;65(5):948-63.

Dammalli M, Dey G, Madugundu AK, Kumar M, Rodrigues B, Gowda H, Siddaiah BG, Mahadevan A, Shankar SK, Prasad TS. Proteomic analysis of the human olfactory bulb. OMICS: A Journal of Integrative Biology. 2017 Aug 1;21(8):440-53.

Wijesinghe P, Shankar SK, Yasha TC, Gorrie C, Amaratunga D, Hulathduwa S, Kumara KS, Samarasinghe K, Suh YH, Steinbusch HW, De Silva KR. Vascular Contributions in Alzheimer’s Disease-Related Neuropathological Changes: First Autopsy Evidence from a South Asian Aging Population. J Alzheimers Dis. 2016 Sep; [Epub ahead of print].

Wijesinghe P, Shankar SK, Chickabasaviah YT, Gorrie C, Amaratunga D, Hulathduwa S, Kumara KS, Samarasinghe K, Suh YH, Steinbusch HW, De Silva KR. Cytoskeletal Pathologies of Age-Related Diseases between Elderly Sri Lankan (Colombo) and Indian (Bangalore) Brain Samples. Curr Alzheimer Res. United Arab Emirates; 2016;13(3):268–8.

Vijaykumar BR, Lekshmi SU, Sai Kant R, Vaigundan D, Mahadevan A, Rajendran C, Shankar SK, Jayshree RS. Genetic characterization of Toxoplasma gondii from autopsy proven cases of AIDS associated cerebral toxoplasmosis in South India. Infect Genet Evol. 2016 Jan; 39:106–12.

Radhakrishnan A, Nanjappa V, Raja R, Sathe G, Puttamallesh VN, Jain AP, Pinto SM, Balaji SA, Chavan S, Sahasrabuddhe NA, Mathur PP. A dual specificity kinase, DYRK1A, as a potential therapeutic target for head and neck squamous cell carcinoma. Scientific reports. 2016 Oct 31;6(1):36132.

Mahadevan A, Suja MS, Mani RS, Shankar SK. Perspectives in diagnosis and treatment of rabies viral encephalitis: insights from pathogenesis. Neurotherapeutics. 2016 Jun 1;13(3):477-92.

Shankar SK. Let us promote bio-banking in India for translational research. Neurol India. India; 2015;63(5):644–6.

Selvan LDN, Sreenivasamurthy SK, Kumar S, Yelamanchi SD, Madugundu AK, Anil AK, Renuse S, Nair BG, Gowda H, Mathur PP, Satishchandra P, Shankar SK. Characterization of host response to Cryptococcus neoformans through quantitative proteomic analysis of cryptococcal meningitis co-infected with HIV. MolBiosyst. England; 2015 Sep;11(9):2529–40.

Sarada Subramanian, Anita mahadevan, P Satishchandra, Shankar SK. Development of a dot blot assay with antibodies to recombinant ‘core’ 14-3-3 protein: Evaluation of its usefulness in diagnosis of creutzfeldt- Jakob disease. Ann Indian AcadNeurolAcad Neurol. 2015;

Pundir AS, Singh UA, Ahuja N, Makhija S, Dikshit PC, Radotra B, Kumar P, Shankar SK, Mahadevan A, Roy TS, Iyengar S. Growth and refinement of excitatory synapses in the human auditory cortex. Brain StructFunct. 2015 Oct;

Mishra M, Varghese RK, Verma A, Das S, Aguiar RS, Tanuri A, Mahadevan A, Shankar SK, Satishchandra P, Ranga U.Genetic diversity and proviral DNA load in different neural compartments of HIV-1 subtype C infection. J Neurovirol. United States; 2015 Aug; 21(4):399–414.

Mahadevan A, Rao CR, Shanmugham M, Shankar SK. Primary central nervous system diffuse large B-cell lymphoma in the immunocompetent: Immunophenotypic subtypes and Epstein-Barr virus association. J Neurosci Rural Pract. India; 2015 Jan;6(1):8–14.

Jyothi HJ, Vidyadhara DJ, Mahadevan A, Philip M, Parmar SK, Manohari SG, Shankar SK, Raju TR, Alladi PA. Aging causes morphological alterations in astrocytes and microglia in human substantia nigra pars compacta. Neurobiol Aging. United States; 2015 Dec; 36(12):3321–33.

Harish G, Mahadevan A, Pruthi N, Sreenivasamurthy SK, Puttamallesh VN, Keshava Prasad TS, Shankar SK, Srinivas Bharath MM. Characterization of traumatic brain injury in human brains reveals distinct cellular and molecular changes in contusion and pericontusion. J Neurochem. England; 2015 Jul;134(1):156–72.

Fatima M, Kumari R, Schwamborn JC, Mahadevan A, Shankar SK, Raja R, Seth P.Tripartite containing motif 32 modulates proliferation of human neural precursor cells in HIV-1 neurodegeneration. Cell Death Differ. 2015 Nov;

Dhiman V, Sinha S, Arimappamagan A, Mahadevan A, Bharath RD, Saini J, Rajeswaran J, Rao MB, Shankar SK, Satishchandra P. Predictors of spontaneous transient seizure remission in patients of medically refractory epilepsy due to mesial temporal sclerosis (MTS). Epilepsy Res. Netherlands; 2015 Feb;110: 55–61.

Cardenas G, Guevara-Silva E, Romero F, Ugalde Y, Bonnet C, Fleury A, Sciutto E, Nunes CM, Soto-Hernández JL, Shankar SK, Mahadevan A. Spinal Taenia solium cysticercosis in Mexican and Indian patients: a comparison of 30-year experience in two neurological referral centers and review of literature. Eur spine J Off PublEur Spine SocEur Spinal Deform SocEur Sect Cerv Spine Res Soc. 2015 Oct;

Wang C, Klechikov AG, Gharibyan AL, Warmlander SKTS, Jarvet J, Zhao L, Jia X, Narayana VK, Shankar SK, Olofsson A, Brännström T, Mu Y, Gräslund A,Morozova-Roche LA. The role of pro-inflammatory S100A9 in Alzheimer’s disease amyloid-neuroinflammatory cascade. ActaNeuropathol. Germany; 2014 Apr;127(4):507–22.

Tripathi S, Patro I, Mahadevan A, Patro N, Phillip M, Shankar SK. Glial alterations in tuberculous and cryptococcal meningitis and their relation to HIV co-infection--a study on human brains. J Infect Dev Ctries. Italy; 2014 Nov;8(11):1421–43.

Thounaojam MC, Kundu K, Kaushik DK, Swaroop S, Mahadevan A, Shankar SK, Basu A. MicroRNA 155 regulates Japanese encephalitis virus-induced inflammatory response by targeting Src homology 2-containing inositol phosphatase 1. J Virol. United States; 2014 May;88(9):4798–810.

SK Shankar, Anita Mahadevan GH and MMSB. Human Brain Tissue Repository: A National Facility Fostering Neurosciences Research. ProcNatlAcadSciIndia, Sect B BiolSci. 2014;84(2):239–50.

Savitr Sastri B V, Arivazhagan A, Sinha S, Mahadevan A, Bharath RD, Saini J, Jamuna R, Kumar JK, Rao SL, Chandramouli BA, Shankar SK ,Satishchandra P. Clinico-pathological factors influencing surgical outcome in drug resistant epilepsy secondary to mesial temporal sclerosis. J Neurol Sci. Netherlands; 2014 May;340(1-2):183–90.

Sahu A, Kumar S, Sreenivasamurthy SK, Selvan LDN, Madugundu AK, Yelamanchi SD, Puttamallesh VN, Dey G, Anil AK, Srinivasan A, Mukherjee KK, Gowda H, Satishchandra P, Mahadevan A, Pandey A, Prasad TS,Shankar SK. Host response profile of human brain proteome in toxoplasma encephalitis co-infected with HIV. Clin Proteomics. England; 2014;11(1):39.

Pradeep K, Sinha S, Saini J, Mahadevan A, Arivazhagan A, Bharath RD, Bindu PS, Jamuna R, Rao MB, Chandramouli BA, Shankar SK, Satishchandra P. Evolution of MRI changes in Rasmussen’s encephalitis. ActaNeurol Scand. Denmark; 2014 Oct;130(4):253–9.

Nazmi A, Mukherjee S, Kundu K, Dutta K, Mahadevan A, Shankar SK, Basu A. TLR7 is a key regulator of innate immunity against Japanese encephalitis virus infection. Neurobiol Dis. United States; 2014 Sep;69:235–47.

Mani RS, Madhusudana SN, Mahadevan A, Reddy V, Belludi AY, Shankar SK. Utility of real-time Taqman PCR for antemortem and postmortem diagnosis of human rabies. J Med Virol. United States; 2014 Oct;86(10):1804–12.

Mangalore S, Desai S, Mahadevan A, Kovoor JME, Vasudev LMK, Tally AB, Shankar SK. Cerebral tubercular thrombophlebitis presenting as venous infarct: Magnetic resonance imaging and pathologic correlation. Ann Indian Acad Neurol. India; 2014 Jan;17(1):130–4.

Kim MS, Pinto SM, Getnet D, Nirujogi RS, Manda SS, Chaerkady R, Madugundu AK, Kelkar DS, Isserlin R, Jain S, Thomas JK. A draft map of the human proteome. Nature. 2014 May 29;509(7502):575-81.

Govindan A, Mahadevan A, Chakraborti S, Furtado S, Krishna SS. Absence of anaplastic lymphoma kinase-1 expression in inflammatory myofibroblastic tumors of the central nervous system: does it signify a different nosologic entity from its systemic counterpart? Indian J PatholMicrobiol. India; 2014;57(2):178

Chikkannaiah P, Mahadevan A, Gosavi M, Kangle R, Anuradha, Shankar SK. Sirenomelia with associated systemic anomalies: an autopsy pathologic illustration of a series of four cases. Pathol Res Pract. Germany; 2014 Jul;210(7):444–9.

Venugopal AK, Ghantasala SSK, Selvan LDN, Mahadevan A, Renuse S, Kumar P, Pawar H, Sahasrabhuddhe NA, Suja MS, Ramachandra YL, Prasad TS, Madhusudhana SN, Hc H, Chaerkady R, Satishchandra P, Pandey A, Shankar SK. Quantitative proteomics for identifying biomarkers for Rabies. Clin Proteomics. England; 2013;10(1):3.

Shyambabu C, Satishchandra P, Mahadevan A, Pillai Shibu V, Ravishankar S, Sidappa N, Udaykumar R, Ravi V, Shankar SK. Usefulness of stereotactic biopsy and neuroimaging in management of HIV-1 Clade C associated focal brain lesions with special focus on cerebral toxoplasmosis. ClinNeurolNeurosurg. Netherlands; 2013 Jul;115(7):995–1002.

Sharma J, Mukherjee D, Rao SN, Iyengar S, Shankar SK, Satishchandra P, Jana NR.. Neuronatin-mediated aberrant calcium signaling and endoplasmic reticulum stress underlie neuropathology in Lafora disease. J Biol Chem. United States; 2013 Mar;288(13):9482–90.

Netravathi M, Mahadevan A, Satishchandra P, Shobha N, Mailankody P, Kandavel T, Jitender S, Anantaram G, Nagarathna S, Govekar S, Ravikumar BV Ravi V, Shankar SK. Progressive multifocal leukoencephalopathy (PML) associated with HIV Clade C--is not uncommon. J Neurovirol. United States; 2013 Jun;19(3):198–208.

Nagappa M, Taly AB, Sinha S, Bharath RD, Mahadevan A, Bindu PS, Saini JS, Prasad C, Shankar SK. Tumefactive demyelination: clinical, imaging and follow-up observations in thirty-nine patients. ActaNeurol Scand. Denmark; 2013 Jul;128(1):39–47.

Mahadevan A, Ramalingaiah AH, Parthasarathy S, Nath A, Ranga U, Krishna SS. Neuropathological correlate of the ‘concentric target sign’ in MRI of HIV-associated cerebral toxoplasmosis. J MagnReson Imaging. United States; 2013 Aug;38(2):488–95.

Kannangai R, Sachithanandham J, Mahadevan A, Abraham AM, Sridharan G, Desai A, Ravi V, Shankar SK. Association of neurotropic viruses in HIV-infected individuals who died of secondary complications of tuberculosis, cryptococcosis, or toxoplasmosis in South India. J ClinMicrobiol. United States; 2013 Mar; 51(3):1022–5.

Harish G, Venkateshappa C, Mahadevan A, Pruthi N, Bharath MMS, Shankar SK. Mitochondrial function in human brains is affected by pre- and post mortem factors. NeuropatholApplNeurobiol. England; 2013 Apr;39(3):298–315.

Harish G, Mahadevan A, Srinivas Bharath MM, Shankar SK. Alteration in glutathione content and associated enzyme activities in the synaptic terminals but not in the non-synaptic mitochondria from the frontal cortex of Parkinson’s disease brains. Neurochem Res. United States; 2013 Jan;38(1):186–200.

Dhiman V, Rao S, Sinha S, Arimappamagan A, Mahadevan A, Bharath RD, Saini J, Jamuna R, Keshav Kumar J, Rao SL, Chandramouli BA, Satishchandra P, Shankar SK. Outcome of lesionectomy in medically refractory epilepsy due to non-mesial temporal sclerosis(non-MTS) lesions. ClinNeurol Neurosurg.Netherlands; 2013 Dec;115(12):2445–53.

Wong KT, Ng KY, Ong KC, Ng WF, Shankar SK, Mahadevan A, Radotra B, Su IJ, Lau G, Ling AE, Chan KP, Macorelles P, Vallet S, Cardosa MJ, Desai A, Ravi V, Nagata N, Shimizu H, Takasaki T. Enterovirus 71 encephalomyelitis and Japanese encephalitis can be distinguished by topographic distribution of inflammation and specific intraneuronal detection of viral antigen and RNA. Neuropathol Appl Neurobiol. England; 2012 Aug;38(5):443–53.

Venugopal AK, Sameer Kumar GS, Mahadevan A, Selvan LDN, Marimuthu A, Dikshit JB, Tata P, Ramachandra Y, Chaerkady R, Sinha S, Chandramouli B, Arivazhagan A, Satishchandra P, Shankar SK, Pandey A. Transcriptomic Profiling of Medial Temporal Lobe Epilepsy. J Proteomics Bioinform. 2012 Jan;5(2).

Venkateshappa C, Harish G, Mythri RB, Mahadevan A, Bharath MMS, Shankar SK. Increased oxidative damage and decreased antioxidant function in aging human substantia nigra compared to striatum: implications for Parkinson’s disease. Neurochem Res. United States; 2012 Feb;37(2):358–69.

Venkateshappa C, Harish G, Mahadevan A, Srinivas Bharath MM, Shankar SK. Elevated oxidative stress and decreased antioxidant function in the human hippocampus and frontal cortex with increasing age: implications for neurodegeneration in Alzheimer’s disease. Neurochem Res. United States; 2012 Aug;37(8):1601–14.

Shankar SK, Mahadevan A. Biobanking for cancer research: Preservation of tissue integrity – Some technical considerations. Ind Jour Neurosurg. 2012;1(2):130–8.

Shankar SK, Mahadevan A, Sapico SD, Ghodkirekar MSG, Pinto RGW, Madhusudana SN. Rabies viral encephalitis with proable 25 year incubation period!. Ann Indian Acad Neurol. India; 2012 Jul;15(3):221–3.

Shankar S K, Mahadevan A. Biobanking for cancer research: Preservation of tissue integrity – Some technical considerations. Ind Jour Neurosurg. 2012;1(2):130–8.

Pundir AS, Hameed LS, Dikshit PC, Kumar P, Mohan S, Radotra B, Shankar SK, Mahadevan A, Iyengar S. Expression of medium and heavy chain neurofilaments in the developing human auditory cortex. Brain Struct Funct. Germany; 2012 Apr;217(2):303–21.

Kumar GSS, Venugopal AK, Mahadevan A, Renuse S, Harsha HC, Sahasrabuddhe NA, Pawar H, Sharma R, Kumar P, Rajagopalan S, Waddell K, Ramachandra YL, Satishchandra P, Chaerkady R, Prasad TS, Shankar SK, Pandey A. Quantitative proteomics for identifying biomarkers for tuberculous meningitis. Clin Proteomics. England; 2012;9(1):12.

Jethwani DP, Mahadevan A, Ramamurthy BS, Mangala R, Shankar SK. Septo-optic dysplasia: an autopsy study of a 23-week fetus. Clin Neuropathol. Germany; 2012;31(1):44–50.

Jadav R, Sinha S, Nagarathna S, Bindu P, Mahadevan A, Bharath R, Shankar S, Taly A. Carcinomatous meningitis: Yet another cause for rapidly progressive dementia and triphasic waves in electroencephalograph! J Neurosci Rural Pract. India; 2012 May;3(2):207–9.

Chakraborti S, Mahadevan A, Govindan A, Bhateja A, Dwarakanath S, Aravinda HR, Phalguni AA, Santosh V, Yasha TC, Rout P, Sampath S, Shankar SK. Rosette-forming glioneuronal tumor -- evidence of stem cell origin with biphenotypic differentiation. Virchows Arch. Germany; 2012 Nov;461(5):581–8.

Bachu M, Yalla S, Asokan M, Verma A, Neogi U, Sharma S, Murali RV, Mukthey AB, Bhatt R, Chatterjee S, Rajan RE, Cheedarla N, Yadavalli VS, Mahadevan A, Shankar SK et al. Multiple NF-kappaB sites in HIV-1 subtype C long terminal repeat confer superior magnitude of transcription and thereby the enhanced viral predominance. J Biol Chem. United States; 2012 Dec;287(53):44714–35.

Bachu M, Mukthey AB, Murali R V, Cheedarla N, Mahadevan A, Shankar SK, Satish KS, Kundu TK, Ranga U. Sequence insertions in the HIV type 1 subtype C viral promoter predominantly generate an additional NF-kappaB binding site. AIDS Res Hum Retroviruses. United States; 2012 Oct;28(10):1362

Wairagkar N, Chowdhury D, Vaidya S, Sikchi S, Shaikh N, Hungund L, Tomar RS, Biswas D, Yadav K, Mahanta J, Das VN, Yergolkar P, Gunasekaran P, Raja D, Jadi R, Ramamurty N, Mishra AC, Arun K, Biswas AK, Bag B, Debberma S, Dhole TN, De S, Das PK, Dwibedi B, Gupta SN, Illankumar M, Jampa L, Ketkar A, Kumar N, Kumar R, Khobragade P, Kadri SM, Mahadevan A, Murhekar M, Gupte MD, Martolia H, Mazi D, Ratho RK, Shankar SK, Slathia S, Sugunan AP, Vittal CS, Vijaykumar G,Vashishtha VM. Molecular epidemiology of measles in India, 2005-2010. J Infect Dis. United States; 2011 Jul; 204Suppl :S403–13.

Sundaram C, Shankar SK, Thong WK, Pardo-Villamizar CA. Pathology and diagnosis of central nervous system infections. Patholog Res Int. United States; 2011;2011:878263.

Suja MS, Mahadevan A, Madhusudana SN, Shankar SK. Role of apoptosis in rabies viral encephalitis: a comparative study in mice, canine, and human brain with a review of literature. Patholog Res Int. United States; 2011;2011:374286.

Sharma J, Rao SNR, Shankar SK, Satishchandra P, Jana NR. Lafora disease ubiquitin ligase malin promotes proteasomal degradation of neuronatin and regulates glycogen synthesis. Neurobiol Dis. United States; 2011 Oct;44(1):133–41.

Shankar SK. Human umbilical cord blood-derived mesenchymal stem cells and their effect on gliomas. Neurology India. India; 2011. p. 226–8.

Shankar SK, Kumar SKP, Mulimani VH. Calcium alginate entrapped preparation of alpha-galactosidase: its stability and application in hydrolysis of soymilk galactooligosaccharides. J IndMicrobiolBiotechnol. England; 2011 Sep;38(9):1399–405.

Sameer Kumar G S, Abhilash KV, Lakshmi Devi N S, Marimuthy A, Shivakumar K, Swapnali P, Jyoti B D, Pramila T, Ramesh H, Keshava Prasad T S, Harsha H C, Ramachandra Y L, Mahadevan A, Ragothama C, Shankar S K, Akhilesh P. Gene Expression Profiling of Tuberculous Meningitis. J Proteomics Bioinform. 2011;4(5):98–105.

Reddy GBM, Singh R, Singh RP, Singh KP, Gupta PK, Mahadevan A, Shankar SK, Ramakrishnan MA, Verma R. Molecular characterization of Indian rabies virus isolates by partial sequencing of nucleoprotein (N) and phosphoprotein (P) genes. Virus Genes. United States; 2011 Aug;43(1):13–7.

Mythri RB, Venkateshappa C, Harish G, Mahadevan A, Muthane UB, Yasha TC, Srinivas Bharath MM, Shankar SK. Evaluation of markers of oxidative stress, antioxidant function and astrocytic proliferation in the striatum and frontal cortex of Parkinson’s disease brains. Neurochem Res. United States; 2011 Aug;36(8):1452–63.

Harish G, Venkateshappa C, Mahadevan A, Pruthi N, Srinivas Bharath MM, Shankar SK. Glutathione metabolismis modulated by postmortem interval, gender difference and agonal state in postmortem human brains. Neurochem Int. England; 2011 Dec;59(7):1029–42.

Harish G, Venkateshappa C, Mahadevan A, Pruthi N, Bharath MMS, Shankar SK. Effect of storage time, postmortem interval, agonal state, and gender on the postmortem preservation of glial fibrillary acidic protein and oxidatively damaged proteins in human brains. Biopreserv Biobank. United States; 2011 Dec;9(4):379–87.

Adurthi S, Mahadevan A, Bantwal R, Satishchandra P, Ramprasad S, Sridhar H, Shankar SK, Nath A, Jayshree RS. Diagnosis of cerebral toxoplasmosis. Ann Indian Acad Neurol. India; 2011 Apr;14(2):145–6.

Sinha S, Satishchandra P, Mahadevan A, Bhimani BC, Kovur JME, Shankar SK. Fatal status epilepticus: a clinico-pathological analysis among 100 patients: from a developing country perspective. Epilepsy Res. Netherlands; 2010 Oct;91(2-3):193–204.

Shankar SK. Biology of aging brain. Indian J PatholMicrobiol. India; 2010;53(4):595–604.

Rao SNR, Maity R, Sharma J, Dey P, Shankar SK, Satishchandra P,Jana NR. Sequestration of chaperones and proteasome into Lafora bodies and proteasomal dysfunction induced by Lafora disease-associated mutations of malin. Hum Mol Genet. England; 2010 Dec;19(23):4726–34.

Rafi W, Chandramuki A, Mani R, Satishchandra P, Shankar SK. Rapid diagnosis of acute bacterial meningitis: role of a broad range 16S rRNA polymerase chain reaction. J Emerg Med. 2010 Feb;38(2):225-30.

Pruthi N, Chandramouli BA, Kuttappa TB, Rao SL, Subbakrishna DK, Abraham MP, et al. Apolipoprotein E polymorphism and outcome after mild to moderate traumatic brain injury: a study of patient population in India. Neurol India. India; 2010;58(2):264–9.

Prashanth LK, Sinha S, Taly AB, Mahadevan A, Vasudev MK, Shankar SK. Spectrum of epilepsy in Wilson’s disease with electroencephalographic, MR imaging and pathological correlates. J Neurol Sci. Netherlands; 2010 Apr;291(1-2):44–51.

Kumar GGS, Mahadevan A, Guruprasad AS, Kovoor JME, Satishchandra P, Nath A, Ranga U, Shankar SK. Eccentric target sign in cerebral toxoplasmosis: neuropathological correlate to the imaging feature. J MagnReson Imaging. United States; 2010 Jun; 31(6):1469–72.

Kulkarni GB, Mahadevan A, Taly AB, Nalini A, Shankar SK. Sural nerve biopsy in chronic inflammatory demyelinating polyneuropathy: are supportive pathologic criteria useful in diagnosis? Neurol India. India; 2010;58(4):542–8.

Gadre G, Satishchandra P, Mahadevan A, Suja MS, Madhusudana SN, Sundaram C, Shankar SK. Rabies viral encephalitis: clinical determinants in diagnosis with special reference to paralytic form. J NeurolNeurosurg Psychiatry. England; 2010Jul;81(7):812–20.

Alladi PA, Mahadevan A, Vijayalakshmi K, Muthane U, Shankar SK, Raju TR. Ageing enhances alpha-synuclein, ubiquitin and endoplasmic reticular stress protein expression in the nigral neurons of Asian Indians. Neurochem Int. England; 2010 Nov;57(5):530–9.

Alladi PA, Mahadevan A, Shankar SK, Raju TR, Muthane U. Expression of GDNF receptors GFRalpha1 and RET is preserved in substantia nigra pars compacta of aging Asian Indians. J Chem Neuroanat. 2010 Mar 25. [Epub ahead of print] PubMed

Adurthi S, Mahadevan A, Bantwal R, Satishchandra P, Ramprasad S, Sridhar H, Shankar SK, Nath A, Jayshree RS. Utility of molecular and serodiagnostic tools in cerebral toxoplasmosis with and without tuberculous meningitis in AIDS patients: A study from South India. Ann Indian Acad Neurol. India; 2010 Oct;13(4):263–70.

Suja MS, Mahadevan A, Madhusudhana SN, Vijayasarathi SK, Shankar SK. Neuroanatomical mapping of rabies nucleocapsid viral antigen distribution and apoptosis in pathogenesis in street dog rabies--an immunohistochemical study. Clin Neuropathol. 2009 Mar-pr;28(2):113-24.

Kher M, Rao MY, Acharya PT, Mahadevan A, Shankar SK. Heidenhain variant of Creutzfeldt-Jakob disease: An autopsy study from India. Ann Indian Acad Neurol.2009 Jan;12(1):48-51.

Gadre G, Satishchandra P, Mahadevan A, Suja M, Madhusudana S, Sundaram C, Shankar S. Rabies viral encephalitis - clinical determinants in diagnosis with special reference to paralytic form. J Neurol Neurosurg Psychiatry. 2009

Chakraborti S, Mahadevan A, Govindan A, Nagarathna S, Santosh V, Yasha TC, Devi BI, Chandramouli BA, Kovoor JM, Chandramuki A, Shankar SK. Clinicopathological study of tuberculous brain abscess. Pathol Res Pract. 2009;205(12):815-22.

Bhattacharyya S, Khanna S, Chakrabarty K, Mahadevan A, Christopher R, Shankar SK. Anti-brain autoantibodies and altered excitatory neurotransmitters in obsessive-compulsive disorder. Neuropsychopharmacology. 2009 Nov;34(12):2489-96.

Bharatkumar VP, Nagaraja D, Shankar SK, Christopher R. Hyperhomocysteinemia and MTHFR C677T homozygosity in a vegetarian male with sinovenous thrombosis of the brain. J Clin Neurosci. 2009 Oct;16(10):1380-1.

Alladi PA, Mahadevan A, Yasha TC, Raju TR, Shankar SK, Muthane U. Absence of age-related changes in nigral dopaminergic neurons of Asian Indians: relevance to lower incidence of Parkinson's disease. Neuroscience. 2009 Mar 3;159(1):236-45.

Singh S, Satishchandra P, Shankar SK, Ganesh S. Lafora disease in the Indian population: EPM2A and NHLRC1 gene mutations and their impact on subcellular localization of laforin and malin. Hum Mutat. 2008 Jun;29(6):E1-12.

Shankar SK, Mahadevan A, Kovoor JM. Neuropathology of viral infections of the central nervous system. Neuroimaging Clin N Am. 2008 Feb;18(1):19-39; vii.

Meenakshi-Sundaram S, Mahadevan A, Taly AB, Arunodaya GR, Swamy HS, Shankar SK. Wilson's disease: a clinico-neuropathological autopsy study. J Clin Neurosci.2008 Apr;15(4):409-17.

Mahadevan A, Vaidya SR, Wairagkar NS, Khedekar D, Kovoor JM, Santosh V, Yasha TC, Satishchandra P, Ravi V, Shankar SK. Case of fulminant-SSPE associated with measles genotype D7 from India: an autopsy study. Neuropathology. 2008 Dec;28(6):621-6.

Li W, Huang Y, Reid R, Steiner J, Malpica-Llanos T, Darden TA, Shankar SK,Mahadevan A, Satishchandra P, Nath A. NMDA receptor activation by HIV-Tat protein is clade dependent. J Neurosci. 2008 Nov 19;28(47):12190-8.

Kapoor A, Satishchandra P, Ratnapriya R, Reddy R, Kadandale J, Shankar SK, Anand A. An idiopathic epilepsy syndrome linked to 3q13.3-q21 and missense mutations in the extracellular calcium sensing receptor gene. Ann Neurol. 2008 Aug;64(2):158-67.

De Silva KR, Shankar SK, Mahadevan A, Dodd PR. A brain bank for Sri Lanka. Ceylon Med J. 2008 Dec;53(4):139-40.

Dash PK, Siddappa NB, Mangaiarkarasi A, Mahendarkar AV, Roshan P, Anand KK, Mahadevan A, Satishchandra P, Shankar SK, Prasad VR, Ranga U. Exceptional molecular and coreceptor-requirement properties of molecular clones isolated from an Human Immunodeficiency Virus Type-1 subtype C infection. Retrovirology. 2008 Mar 7;5:25.

Sundar P, Mahadevan A, Jayshree RS, Subbakrishna DK, Shankar SK. Toxoplasma seroprevalence in healthy voluntary blood donors from urban Karnataka. Indian J Med Res. 2007 Jul;126(1):50-5.

Sinha S, Satishchandra P, Gayathri N, Yasha TC, Shankar SK. Progressive myoclonic epilepsy: A clinical, electrophysiological and pathological study from South India. J Neurol Sci. 2007 Jan 15;252(1):16-23.

Siddappa NB, Kashi VP, Venkatramanan M, Balasiddaiah A, Jayasuryan N,Mahadevan A, Desai A, Satish KS, Shankar SK, Ravi V, Ranga U. Gene expression analysis from human immunodeficiency virus type 1 subtype C promoter and construction of bicistronic reporter vectors. AIDS Res Hum Retroviruses. 2007 Oct;23(10):1268-78.

Shukla D, Mahadevan A, Sastry KV, Shankar SK. Pathology of post traumatic brainstem and hypothalamic injuries. Clin Neuropathol. 2007 Sep-Oct;26(5):197-209.

Shankar SK, Mahadevan A, Sundaram C, Sarkar C, Chacko G, Lanjewar DN, Santosh V, Yasha TC, Radhakrishnan VV. Pathobiology of fungal infections of the central nervous system with special reference to the Indian scenario. Neurol India. 2007 Jul-Sep;55(3):198-215.

Satishchandra P, Mathew T, Gadre G, Nagarathna S, Chandramukhi A, Mahadevan A, Shankar SK. Cryptococcal meningitis: clinical, diagnostic and therapeutic overviews. Neurol India. 2007 Jul-Sep;55(3):226-32.

Mahadevan A, Shankar SK, Satishchandra P, Ranga U, Chickabasaviah YT, Santosh V, Vasanthapuram R, Pardo CA, Nath A, Zink MC. Characterization of human immunodeficiency virus (HIV)-infected cells in infiltrates associated with CNS opportunistic infections in patients with HIV clade C infection. J Neuropathol Exp Neurol. 2007 Sep;66(9):799-808.

Christopher R, Nagaraja D, Shankar SK. Homocysteine and cerebral stroke in developing countries. Curr Med Chem. 2007;14(22):2393-401.

Ullal GR, Satishchandra P, Kalladka D, Rajashekar K, Archana K, Mahadevan A, Shankar SK. Kindling & mossy fibre sprouting in the rat hippocampus following hot water induced hyperthermic seizures. Indian J Med Res. 2006 Sep;124(3):331-42.

Rani SB, Mahadevan A, Anilkumar SR, Raju TR, Shankar SK. Expression of nestin--a stem cell associated intermediate filament in human CNS tumours. Indian J Med Res. 2006 Sep;124(3):269-80.

Muthane UB, Chickabasaviah YT, Henderson J, Kingsbury AE, Kilford L, Shankar SK, Subbakrishna DK, Lees AJ. Melanized nigral neuronal numbers in Nigerian and British individuals. Mov Disord. 2006 Aug;21(8):1239-41.

Mahadevan A, Satishchandra P, Prachet KK, Sidappa NB, Ranga U, Santosh V, Yasha TC, Desai A, Ravi V, Shankar SK. Optic nerve axonal pathology is related to abnormal visual evoked responses in AIDS. Acta Neuropathol. 2006 Oct;112(4):461-9.

Hegde ML, Gupta VB, Anitha M, Harikrishna T, Shankar SK, Muthane U, Subba Rao K, Jagannatha Rao KS. Studies on genomic DNA topology and stability in brain regions of Parkinson's disease. Arch Biochem Biophys. 2006 May 15;449(1-2):143-56.

Siddappa NB, Dash PK, Mahadevan A, Desai A, Jayasuryan N, Ravi V, Satishchandra P, Shankar SK, Ranga U. Identification of unique B/C recombinant strains of HIV-1 in the southern state of Karnataka, India. AIDS. 2005 Sep2;19(13):1426-9.

Shankar SK, Mahadevan A, Satishchandra P, Kumar RU, Yasha TC, Santosh V, Chandramuki A, Ravi V, Nath A. Neuropathology of HIV/AIDS with an overview of the Indian scene. Indian J Med Res. 2005 Apr;121(4):468-88.

Gupta VB, Anitha S, Hegde ML, Zecca L, Garruto RM, Ravid R, Shankar SK, Stein R, Shanmugavelu P, Jagannatha Rao KS. Aluminium in Alzheimer's disease: are we still at a crossroad? Cell Mol Life Sci. 2005 Jan;62(2):143-58.

Suja MS, Mahadevan A, Sundaram C, Mani J, Sagar BC, Hemachudha T, Wacharapluesadee S, Madhusudana SN, Shankar SK. Rabies encephalitis following fox bite--histological and immunohistochemical evaluation of lesions caused by virus. Clin Neuropathol. 2004 Nov-Dec;23(6):271-6.

Sinha S, Satishchandra P, Santosh V, Gayatri N, Shankar SK. Neuronal ceroid lipofuscinosis: a clinicopathological study. Seizure. 2004 Jun;13(4):235-40.

Siddappa NB, Dash PK, Mahadevan A, Jayasuryan N, Hu F, Dice B, Keefe R, Satish KS, Satish B, Sreekanthan K, Chatterjee R, Venu K, Satishchandra P, Ravi V, Shankar SK, Shankarappa R, Ranga U. Identification of subtype C human immunodeficiency virus type 1 by subtype-specific PCR and its use in the characterization of viruses circulating in the southern parts of India. J Clin Microbiol. 2004 Jun;42(6):2742-51.

Ranga U, Shankarappa R, Siddappa NB, Ramakrishna L, Nagendran R, Mahalingam M, Mahadevan A, Jayasuryan N, Satishchandra P, Shankar SK, Prasad VR. Tat protein of human immunodeficiency virus type 1 subtype C strains is a defective chemokine. J Virol. 2004 Mar;78(5):2586-90.

Sougata Saha and P N Rangarajan (2003) Common host genes are activated in mouse brain by Japanese Encephalitis and Rabies viruses. J.Gen. Virol. (in press).

Rao CR, Jain K, Bhatia K, Laksmaiah KC, Shankar SK. Association of primary central nervous system lymphomas with the Epstein-Barr virus. Neurol India. 2003 Jun;51(2):237-40.

Ramakrishna C, Ravi V, Desai A, Subbakrishna DK, Shankar SK, Chandramuki A. T helper responses to Japanese encephalitis virus infection are dependent on the route of inoculation and the strain of mouse used. J Gen Virol. 2003 Jun;84(Pt 6):1559-67.

Jayakumar PN, Srikanth SG, Chandrashekar HS, Kovoor JM, Shankar SK, Anandh B. Pyruvate: an in vivo marker of cestodal infestation of the human brain on proton MR spectroscopy. J Magn Reson Imaging. 2003 Dec;18(6):675-80.

SJ Chinta, H Pai, Sudarshan C, Upadhya, MR Boyd, V Ravindranath. Constitutive expression and localisation of major drug metabolising enzyme Cytochrome P 4502D in human brain. Mol Brain Res. 2002 Jun 30; 103(1-2) : 49-61.

Shankar SK, A Mahadevan. Human Brain Bank at NIMHANS. Current Science, Vol.83, No.5:544-545, September 2002.

Pai HV, Upadhya SC, Chinta SJ, Hegde SN, Ravindranath V. Differential metabolism of alprazolam by liver and brain cytochrome(P4503A) to pharmacologically active metabolite. Pharmacogenesis. J. 2002; 2(4): 243-58.

Mahadevan A, Shankar SK, Yasha TC, Santosh V, Sarkar C, Desai AP, Satishchandra P. Brain biopsy in Creutzfeldt-Jakob disease: evolution of pathological changes by prion protein immunohistochemistry. Neuropathol Appl Neurobiol. 2002 Aug;28(4):314-24.

Chandramuki A, Lyashchenko K, Kumari HB, Khanna N, Brusasca P, Gourie-Devi M, Satishchandra P, Shankar SK, Ravi V, Alcabes P, Kanaujia GV, Gennaro ML. Detection of antibody to Mycobacterium tuberculosis protein antigens in the cerebrospinal fluid of patients with tuberculous meningitis. J Infect Dis. 2002 Sep 1;186(5):678-83.

Mahadevan A, Gayathri N, Taly AB, Santosh V, Yasha TC, Shankar SK. Vasculitic neuropathy in HIV infection: a clinicopathological study. Neurol India. 2001 Sep;49(3):277-83.

Shankar SK, Gourie – Devi M, Lalitha Shankar, Yasha TC, Vani Santosh, Sarla Das. Pathology of Madras type of motor neuron disease (MMND) – a histological and immunohistochemical study. Acta Neuropathologica 2000; 99: 428-434.

SC Upadhya, PS Tirumalai, MR Boyd, T Mori, V Ravindranath. Cytochrome P4502e (Cyp2e) in brain: Constitutive expression, induction by ethanol and localisation by Fluorescent insitu hybridisation, Archives of Biophysics Biochemistry 2000; 373: 23-34.

Satishchandra P, Nalini A, Gourie-Devi M, Neelam Khanna, Vani Santosh, Ravi V, Anita Desai, Chandramukhi A, Jaykumar PN, Shankar SK . Profile of neurologic disorders associated with HIV/AIDS from Bangalore, India (1989-1996). Indian Journal of Medical Research 2000; 111: 14-23.

S Balijepalli, MR Boyd, V Ravindranath. Human brain Thiol transferase: Constitutive expression and localisation by Fluorescence insitu hybridisation. Mol Brain Res. 2000 Dec 28; 85(1-2): 123-32.

Khanna N, Chandramuki A, Desai A, Ravi V, Santosh V, Shankar SK, Satishchandra P. Cryptococcosis in the immunocompromised host with special reference to AIDS. Indian J Chest Dis Allied Sci. 2000 Oct-Dec;42(4):311-5.

Bhagwat SV, Boyd MR, Ravindranath V. Multiple forms of Cytochrome P 450 and associated monooxygenase activities in the human brain mitochodria. Biochemical Pharmacology 2000 59: 573-582.

Shankar SK, Anita Mahadevan. Relevance of Human Brain Banking in Neuroscience – A National Facility. Annals of Indian Academy of Neurology 1999; 2: 59-78.

Satishchandra P, Ullal UR, Shankar SK. Hot water Epilepsy in reflex epilepsies and reflex seizures. In: Advances in Neurology (72): B.G.Zifkin, F.Abderman, A.Ceumanoir, A.J.Rowan (eds.), Lippincott-Raven Publishers, Philadelphia, USA 1998, pp283.

Muthane U, Yasha TC, Shankar SK. Low numbers and no loss of melanised nigral neurons with increasing age in normal human brains from India; Annals of Neurology 1998, 43: 283-287.

Jagdeesh SR, Subhash MN. Effect of antidepressants on intracellular Ca ++ mobilization in human frontal cortex.Biological Psychiatry, 1998; 44: 617-621.

Satishchandra P, Yasha T, Lalitha Shankar, Vani Santosh, Sarla Das, Swamy HS, Shankar SK. Familial Alzheimer’s disease – first report from India. Alzheimer’s Disease and Associated Disorders 1997; 11: 107-109.

Desai A, Shankar SK, Jayakumar PN, Chandramukhi A, Gourie-Devi M, Ravikumar BV, Ravi V. Co-Existence of cerebral cysticercosis with Japanese Encephalitis – A prognostic modulator. Epidemiology Infection 1997; 118: 165.

Satishchandra P, Sharma P, Chatterji S, Shankar SK. Psychiatric manifestations of Creutzfeldt Jacob disease; probable neuropathologic correlates. Neurology India 1996; 44: 43-46.

Khanna N, Shankar SK, Chandramukhi A, Jagannath C. immunohistochemical study of human groEL stress-protein in human nervous system, Indian Journal of Medical Research, 1996; 103: 103-111.

Bhagwat SV, Bhamre S, Boyd MR, Ravindranath V. Cerebral metabolism of imipramine and a purified flavin – containing monooxygenase from human brain. Neuropsychopharmacology 1996, 15/2: 133-142.

Lalitha Shankar, Shankar SK, Yasha TC, Santosh V, Das S. Neuropathology and immunohistochemical study in Parkinson’s disease – a report of two cases. Neurology India 1995, 43: 154-157.

Lalitha Shankar, Shankar SK, Vani Santosh, Taly AB, Nagaraj D, Gourie-Devi M, Satishchandra P, Swamy HS, Sarla Das. Light and ultrastructural pathology of spinal cord in sporadic forms of amyotropic lateral sclerosis from South India. Neurology India 1995, 43: 83-90.

Anita Desai, Shankar SK, Ravi V, Chandramukhi A, Gourie-Devi M. Japanese encephalitis viral antigen in the human brain and its topographic distribution. Acta Neuropathologica 1995, 89: 368-373.

Bhagwat SV, Leelevathi BC, Shankar SK, Boyd MR, Ravindranath V. Cytochrome P450 and associated monooxygenase activities in the rat and human spinal cord: Induction, immunological characterisation and immunocytochemical localization. Neuroscience 1995, 68: 593-601

Bhamre S, Bhagwat SV, Shankar SK, Boyd MR, Ravindranath V. Flavin containing monooxygenase mediated metabolism of psychoactive drugs by human brain microsomes. Brain Research 1995; 672: 276-280.

Ravindranath V, Bhamre S, Bhagwat SV, Anandatheertha HK, Shankar SK, Tirumalai PS. Xenobiotic metabolism in brain. Toxicology Letters 1995; 82/83, 633-638.